BLIMP (Software for Best Linear IMPutation) is a tool for genotype imputation. The BLIMP algorithm works on pooled or summary data and uses chained equations to handle incomplete categorical variables.
Population genetics
Enders CK, Keller BT, Levy R "A fully conditional specification approach to multilevel imputation of categorical and continuous variables." Psychol Methods. 2018 Jun;23(2):298-317. 29. https://doi.org/10.1037/met0000148
PMID: 28557466
Wen X, Stephens M "USING LINEAR PREDICTORS TO IMPUTE ALLELE FREQUENCIES FROM SUMMARY OR POOLED GENOTYPE DATA." Ann Appl Stat. 2010 Sep;4(3):1158-1182. https://doi.org/10.1214/10-aoas338
PMID: 21479081
PMCID: PMC3072818
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