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MSpC

MSpC

Morpheus Spectral Counter (MSpC) is a tool for the calculation of normalized spectral abundance factor (NSAF) values from the output from Morpheus (see links), peptide-MS/MS matching tool.

Topic

Proteomics experiment; Proteomics; Protein structure analysis

Details

  • Operation: Spectrum calculation
  • Software interface: Command-line user interface
  • Language: C#
  • Operating system: Microsoft Windows
  • License: The MIT License
  • Cost: Free
  • Version name: 1.2.1
  • Maturity: Stable
  • Credit: The U.S. Department of Energy Office of Science, Office of Basic Energy Sciences, Chemical Sciences, Geosciences, and Biosciences Division, National Institutes of Health (NIH), National Institute of General Medical Sciences.
  • Contact: rdvierstra _at_ wustl.edu
  • Collection: -

Publications

Gemperline DC, Scalf M, Smith LM, Vierstra RD "Morpheus Spectral Counter: A computational tool for label-free quantitative mass spectrometry using the Morpheus search engine." Proteomics. 2016 Mar;16(6):920-4. https://doi.org/10.1002/pmic.201500420
PMID: 26791624
PMCID: PMC5089804


Jalili V, Matteucci M, Masseroli M, Morelli MJ "Using combined evidence from replicates to evaluate ChIP-seq peaks." Bioinformatics 2015; 31(17):2761-9 https://doi.org/10.1093/bioinformatics/btv293
PMID: 25957351


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