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Annocript

Annocript

Annocript is a tool for the annotation of transcriptomes. The package uses BLAST with UniProt, NCBI Conserved Domain Database and Nucleotide divisions, Gene Ontology, UniPathways, and the Enzyme Commission.

Topic

RNA-Seq; Transcriptomics; Gene transcripts

Details

Publications

Musacchia F, Basu S, Petrosino G, Salvemini M, Sanges R "Annocript: a flexible pipeline for the annotation of transcriptomes able to identify putative long noncoding RNAs." Bioinformatics 2015; 31(13):2199-201 https://doi.org/10.1093/bioinformatics/btv106
PMID: 25701574


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