CellBench is an R tool to benchmark single-cell analysis approaches. CellBench has the means to organize and test mixtures of analysis methods. The CellBench also implements methods to build lists of functions with many parameters, sample, and filter single-cell test targets.
RNA-seq
Tian L, Dong X, Freytag S, Le Cao KA, Su S, JalalAbadi A, Amann-Zalcenstein D, Weber TS, Seidi A, Jabbari JS, Naik SH, Ritchie ME "Benchmarking single cell RNA-sequencing analysis pipelines using mixture control experiments." Nat Methods. 2019 Jun;16(6):479-487. May 27. https://doi.org/10.1038/s41592-019-0425-8
PMID: 31133762
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