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ECFS-DEA

ECFS-DEA

ECFS-DEA (feature selection tool for differential expression analysis) is a tool to select features for differential expression analysis in RNA-seq data.

Topic

RNA-seq; Gene expression

Details

  • Operation: Gene expression analysis
  • Software interface: Command-line user interface
  • Language: Python
  • Operating system: Linux, Mac OS X
  • License: Other
  • Cost: Free
  • Version name: -
  • Credit: Natural Science Foundation of China, China Postdoctoral Science Foundation, Innovation Project of State Key Laboratory of Tree Genetics and Breeding (Northeast Forestry University), Fundamental Research Funds for the Central Universities, National Undergraduate Innovation Project, National Construction Plan of World-class Universities and First-class Disciplines.
  • Contact: Guohua Wang
  • Collection: -

Publications

Zhao X, Jiao Q, Li H, Wu Y, Wang H, Huang S, Wang G "ECFS-DEA: an ensemble classifier-based feature selection for differential expression analysis on expression profiles." BMC Bioinformatics 21(1): 43. https://doi.org/10.1186/s12859-020-3388-y
PMID: 32024464
PMCID: PMC7003361


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