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FusionHunter

FusionHunter

FusionHunter is a tool to identify gene fusion in RNA-seq data sets.

Topic

RNA-seq; Gene transcripts; Oncology; Sequence analysis

Details

  • Operation: Nucleic acid feature detection; Sequence feature detection; RNA-Seq analysis
  • Software interface: Command-line user interface
  • Language: Python
  • Operating system: Linux
  • License: GNU Lesser General Public License v2
  • Cost: Free
  • Version name: -
  • Credit: -
  • Contact: yangli9 _at_ illinois.edu | jianma _at_ illinois.edu
  • Collection: -

Publications

Tilgner H, Nikolaou C, Althammer S, Sammeth M, Beato M, Valcárcel J, Guigó R "Nucleosome positioning as a determinant of exon recognition." Nat. Struct. Mol. Biol. 2009; 16(9):996-1001 https://doi.org/10.1093/bioinformatics/btr265
PMID: 19684599


Download and documentation

Currently not available or not maintained.








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