For better experience, turn on JavaScript!


GRM

GRM

GRM is a tool for technical noise removal in single-cell RNA-seq (scRNA-seq).

Topic

RNA-Seq; Gene expression; Statistics and probability

Details

  • Operation: Standardisation and normalisation
  • Software interface: Command-line user interface
  • Language: R
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
  • Cost: Free
  • Version name: 0.2.1
  • Credit: The National Institutes of Health (NIH).
  • Contact: Wei Wang wei-wang _at_ ucsd.edu
  • Collection: -

Publications

Ding B, Zheng L, Zhu Y, Li N, Jia H, Ai R, Wildberg A, Wang W "Normalization and noise reduction for single cell RNA-seq experiments." Bioinformatics 2015; 31(13):2225-7 https://doi.org/10.1093/bioinformatics/btv122
PMID: 25717193
PMCID: PMC4481848


Download and documentation








If you find errors, please report here.