RNA-Skim is a tool to quantify transcripts in RNA-seq data. The RNA-Skim algorithm uses a concept of sig-mers, a type of k-mers, for quantification based on distinct clusters of transcripts.
RNA-Seq; RNA; Gene expression
Zhang Z, Wang W "RNA-Skim: a rapid method for RNA-Seq quantification at transcript level." Bioinformatics. 2014 Jun 15;30(12):i283-i292. https://doi.org/10.1093/bioinformatics/btu288
PMID: 24931995
PMCID: PMC4058932
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