RNA CoMPASS is a tool to simultaneously analyze host and pathogen transcriptomes using RNA-seq datasets. The RNA CoMPASS package includes a web-based graphical interface together with a control of the computational pipeline.
RNA-seq; Transcriptomics; Infectious disease
Xu G, Strong MJ, Lacey MR, Baribault C, Flemington EK, Taylor CM "RNA CoMPASS: a dual approach for pathogen and host transcriptome analysis of RNA-seq datasets." PLoS One. 2014 Feb 25;9(2):e89445. 2014. https://doi.org/10.1371/journal.pone.0089445
PMID: 24586784
PMCID: PMC3934900
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