For better experience, turn on JavaScript!

ROGUE
Home » Tools » RNA-seq Tools and Software » scRNA-seq » ROGUE

ROGUE

ROGUE is a tool for the quantification of the purity of identified cell clusters in single-cell RNA-seq (scRNA-seq) data.



ROGUE

ROGUE is a tool for the quantification of the purity of identified cell clusters in single-cell RNA-seq (scRNA-seq) data.

Topic

RNA-Seq; Gene expression

Details

  • Operation: Clustering
  • Software interface: Command-line user interface
  • Language: R
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: BSD-3-Clause
    • Cost: Free
  • Version name: 1.0
  • Credit: Beijing Advanced Innovation Centre for Genomics at Peking University, Key Technologies RD Program, National Natural Science Foundation of China.
  • Contact: Baolin Liu pauling.liu _at_ pku.edu.cn | Zemin Zhang zemin _at_ pku.edu.cn
  • Collection: -

Publications

Liu Baolin, Li Chenwei, Li Ziyi, Ren Xianwen, Zhang Zemin "ROGUE: an entropy-based universal metric for assessing the purity of single cell population" bioRxiv https://doi.org/10.1101/819581


Download and documentation







If you find errors, please report here.

SECTIONS

Tutorials
In-house software
Blog
News
Find Jobs
History
Definition of Bioinformatics
ENCYCLOPEDIA
COVID-19
⚬ Timeline of outbreak
⚬ Blog
⚬ Scientific Facts
⚬ Daily statistics
⚬ News


TOOLS


1. SNP Tools
2. GWAS Tools
3. Genotype Imputation Tools
4. MSA tools
5. CNV tools
6. WGA tools
7. RNA-seq tools
8. Proteomics Tools
9. Nucleic Acid Structure Analysis Tools
10. Nucleic Acid Sequence Analysis Tools
11. Sequence Logo Tools
12. In-house Software Tools

Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched




Ads