For better experience, turn on JavaScript!

RPASuite
Home » Tools » RNA-seq Tools and Software » Visualization and Advanced Analysis » RPASuite

RPASuite

RPASuite (RNA Processing Analysis Suite) is a pipeline tool for the identification of differential expression in RNA-seq data. RPASuite suite processes Differentially Processed Loci (DPL) and Coherently Processed Loci (CPL).



RPASuite

RPASuite (RNA Processing Analysis Suite) is a pipeline tool for the identification of differential expression in RNA-seq data. RPASuite suite processes Differentially Processed Loci (DPL) and Coherently Processed Loci (CPL).

Topic

RNA-Seq; RNA; Transcriptomics

Details

  • Operation: RNA-Seq analysis
  • Software interface: Command-line user interface
  • Language: Perl;C;R
  • Operating system: Linux
  • License: GNU General Public License v3
    • Cost: Free
  • Version name: 0.02
    • Maturity: Stable
  • Credit: Innovation Fund Denmark, he Danish Independent Research Council (Technology and Production), the Danish Center for Scientific Computation (DCSC and DeIC).
  • Contact: contact _at_ rth.dk
  • Collection: -

Publications

Pundhir S, Gorodkin J "Differential and coherent processing patterns from small RNAs." Sci Rep. 2015 Jul 13;5:12062. https://doi.org/10.1038/srep12062
PMID: 26166713
PMCID: PMC4499813


Download and documentation







If you find errors, please report here.

SECTIONS

Tutorials
In-house software
Blog
News
Find Jobs
History
Definition of Bioinformatics
ENCYCLOPEDIA
COVID-19
⚬ Timeline of outbreak
⚬ Blog
⚬ Scientific Facts
⚬ Daily statistics
⚬ News


TOOLS


1. SNP Tools
2. GWAS Tools
3. Genotype Imputation Tools
4. MSA tools
5. CNV tools
6. WGA tools
7. RNA-seq tools
8. Proteomics Tools
9. Nucleic Acid Structure Analysis Tools
10. Nucleic Acid Sequence Analysis Tools
11. Sequence Logo Tools
12. In-house Software Tools

Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched




Ads