SPARSim

SPARSim is a tool to simulate single-cell RNa-seq (scRNA-seq) count data. The SPARSim algorithm uses Gamma-Multivariate Hypergeometric model.

Topic

RNA-seq; Transcriptomics; Gene expression

Cost

Credit: PROACTIVE 2017 â€œFrom Single-Cell to Multi-Cells Information Systems Analysisâ€ (Department of Information Engineering, University of Padova).
Contact: Barbara Di Camillo barbara.dicamillo _at_ unipd.it
Collection: -

Baruzzo G, Patuzzi I, Di Camillo B "SPARSim Single Cell: a count data simulator for scRNA-seq data." Bioinformatics. 2019 Oct 9. https://doi.org/10.1093/bioinformatics/btz752
PMID: 31598633

If you find errors, please report here.

SECTIONS

Find thousands of Bioinformatics and Life Science software tools and databases in the newly launched

Ads