VARUS is a tool for genome annotation using RNA-seq reads data. The VARUS algorithm uses reads from NCBI's Sequence Read Archive and depends on samtools, bamtools, fastq-dump, and STAR or HISAT2.
Genomics; RNA; RNA-seq; Genetics
Stanke M, Bruhn W, Becker F, Hoff KJ "VARUS: sampling complementary RNA reads from the sequence read archive." BMC Bioinformatics. 2019 Nov 8;20(1):558. https://doi.org/10.1186/s12859-019-3182-x
PMID: 31703556
PMCID: PMC6842140
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