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Wave-Crest
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Wave-Crest

Wave-Crest is a tool for the reconstruction of cell trajectories in single-cell RNA-seq (scRNA-seq) data.



Wave-Crest

Wave-Crest is a tool for the reconstruction of cell trajectories in single-cell RNA-seq (scRNA-seq) data.

Topic

RNA-seq; Statistics and probability; Gene expression

Details

  • Operation: Expression analysis
  • Software interface: Library; Graphical user interface
  • Language: R
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Apache License 2.0
    • Cost: Free
  • Version name: -
  • Credit: The National Institutes of Health, the Charlotte Geyer Foundation, the Morgridge Institute for Research.
  • Contact: Li-Fang Chu lchu _at_ morgridge.org | lchu _at_ morgridge.org | James A. Thomson jthomson _at_ morgridge.org
  • Collection: -

Publications

Chu LF, Leng N, Zhang J, Hou Z, Mamott D, Vereide DT, Choi J, Kendziorski C, Stewart R, Thomson JA "Single-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm." Genome Biol. 2016 Aug 17;17(1):173. https://doi.org/10.1186/s13059-016-1033-x
PMID: 27534536
PMCID: PMC4989499


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