anndata

AnnData is a Python class to manage annotated data matrices and developed for use with SCANPY (see links).

Topic

Gene expression; Cell biology; Genetics

Cost

Maturity:

Credit: The Helmholtz Postdoc Programme, Initiative and Networking Fund of the Helmholtz Association, the German Research Foundation (DFG).
Contact: Wolf FA alex.wolf _at_ helmholtz-muenchen.de
Collection: SCANPY

Wolf FA, Angerer P, Theis FJ "SCANPY: large-scale single-cell gene expression data analysis." Genome Biol. 2018 Feb 6;19(1):15. https://doi.org/10.1186/s13059-017-1382-0
PMID: 29409532
PMCID: PMC5802054

Source: https://github.com/theislab/anndata
Documentation: https://anndata.readthedocs.io/en/stable
/
Home page: https://github.com/theislab/anndata
Links: https://bioinformaticshome.com/tools/rna
-seq/descriptions/SCANPY.html

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