countsimQC

countsimQC is a tool

Topic

RNA-seq; Statistics and probability; Simulation experiment

Operation: Modelling and simulation; Visualisation; Sequence feature comparison
Software interface: Command-line user interface; Library
Language: R
Operating system: Linux; Mac OS X; Microsoft Windows
License: GNU General Public License v>=2

Cost

Maturity:

Credit: Forschungskredit of the University of Zurich.
Contact: Charlotte Soneson charlotte.soneson _at_ uzh.ch | Mark Robinson mark.robinson _at_ imls.uzh.ch
Collection: -

Soneson C, Robinson MD "Towards unified quality verification of synthetic count data with countsimQC." Bioinformatics 2018; 34(4):691-692 https://doi.org/10.1093/bioinformatics/btx631
PMID: 29028961
PMCID: PMC5860609

Source: https://github.com/csoneson/countsimQC
Documentation: https://github.com/csoneson/countsimQC/b
lob/master/README.md
Home page: https://github.com/csoneson/countsimQC

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