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expVIP
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expVIP

expVIP is a web-based tool for RNA-seq data visualization and analysis of differential expression. The features include a generation of a custom web browser for sorting, filtering, and visualization of RNA-seq data.



expVIP

expVIP is a web-based tool for RNA-seq data visualization and analysis of differential expression. The features include a generation of a custom web browser for sorting, filtering, and visualization of RNA-seq data.

Topic

Plant biology; Gene expression; RNA-seq; Data visualisation

Details

  • Operation: Expression data visualisation; RNA-Seq analysis
  • Input: FASTA
  • Output: -
  • Software interface: Web user interface
  • Language: -
  • Operating system: Linux; Mac OS X; Microsoft Windows
  • License: Not stated
    • Cost: Free
  • Version name: -
    • Maturity: Mature
  • Credit: -
  • Contact: Cristobal Uauy cristobal.uauy _at_ jic.ac.uk.
  • Collection: -

Publications

Borrill P, Ramirez-Gonzalez R, Uauy C "expVIP: a Customizable RNA-seq Data Analysis and Visualization Platform." Plant Physiol. 2016 Apr;170(4):2172-86. 11. https://doi.org/10.1104/pp.15.01667
PMID: 26869702
PMCID: PMC4825114


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