pcaReduce is an R tool to cluster cell expression in RNA-seq data. The pcaReduce algorithm uses a new agglomerative clustering approach to compute the hierarchies of cell states.
Transcriptomics; Gene expression; RNA-Seq
Zurauskiene J, Yau C "pcaReduce: hierarchical clustering of single cell transcriptional profiles." BMC Bioinformatics. 2016 Mar 22;17:140. https://doi.org/10.1186/s12859-016-0984-y
PMID: 27005807
PMCID: PMC4802652
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