GAML is a tool for genome assembly based on maximum likelihood. It implements a probabilistic model to take into account sequencing error rates, insert lengths and other characteristics to produce a final genome assembly. This tool can work on sequenced data generated from multiple sequencing platforms (e.g. Illumina, 454, PacBio).
Sequence assembly
Boza V, Brejova B, Vinar T "GAML: genome assembly by maximum likelihood." Algorithms Mol Biol. 2015 Jun 3;10:18. eCollection 2015. https://doi.org/10.1186/s13015-015-0052-6
PMID: 26042154
PMCID: PMC4454275
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