Rampart is a tool for de novo genome assembly that is implemented as a workflow management system that automatically identify suitable assemblers given users' sequenced data. The workflow is configurable and help users evaluate which assemblers and settings produce the best genome according to some assembly metrics.
Sequence assembly; Workflows
Mapleson D, Drou N, Swarbreck D "RAMPART: a workflow management system for de novo genome assembly." Bioinformatics. 2015 Jun 1;31(11):1824-6. Epub 2015 Jan 30. https://doi.org/10.1093/bioinformatics/btv056
PMID: 25637556
PMCID: PMC4443680
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