1000Genomes ID history converter

1000Genomes ID history converter maps Ensembl gene and genomic feature identifiers from previous Ensembl releases to their corresponding identifiers in current database versions.


Key Features:

  • Ensembl Identifier Conversion: Translates Ensembl IDs from older database releases to their updated identifiers in current Ensembl versions.
  • Version Tracking Across Ensembl Releases: Maintains continuity of gene and genomic feature identifiers as genome assemblies and annotations evolve.
  • Compatibility with Ensembl Resources: Supports workflows that integrate with other Ensembl tools and datasets, including genomic annotations and variant resources.

Scientific Applications:

  • Genomic Dataset Updating: Enables updating of datasets generated from earlier Ensembl releases to current identifier versions.
  • Comparative Genomics Studies: Maintains consistent gene and genomic feature identifiers for cross-study and cross-version analyses.
  • Genome Annotation Consistency: Supports reproducible genomic analyses by ensuring identifier continuity across evolving genome assemblies.

Methodology:

1000Genomes ID history converter matches Ensembl identifiers from earlier database releases to current identifiers using historical mapping information maintained across Ensembl version updates.

Topics

Collections

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
1/29/2015
Last Updated:
3/12/2019

Operations

Publications

Jin Y, Tan S, Yao J, Liu Z. Resources and Bioinformatics Tools in Ensembl. Bioinformatics in Aquaculture. 2017. doi:10.1002/9781118782392.ch27.

Documentation