2D-PAGE

2D-PAGE supports construction and management of federated databases for two-dimensional gel electrophoresis (2-DE) data to organize and analyze distributed proteomics datasets.


Key Features:

  • Federated Database Construction: Enables creation of federated databases that integrate two-dimensional gel electrophoresis (2-DE) datasets from multiple distributed sources.
  • Scalable Data Management: Supports storage, retrieval, and organization of large volumes of experimental proteomics data generated from 2-DE experiments.
  • Distributed Data Integration: Allows integration of proteomics datasets from multiple laboratories or experiments into a unified database framework.

Scientific Applications:

  • Proteomics Data Management: Facilitates organization and analysis of protein expression data derived from two-dimensional gel electrophoresis experiments.
  • Comparative Proteomics: Enables comparison of protein expression profiles across different biological conditions or treatments.
  • Collaborative Proteomics Research: Supports integration and sharing of distributed 2-DE datasets across research groups.

Methodology:

The system employs a federated database architecture that links multiple distributed databases into a unified virtual system, enabling querying and retrieval of two-dimensional gel electrophoresis (2-DE) data across integrated datasets.

Topics

Collections

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
9/11/2015
Last Updated:
11/25/2024

Operations

Data Inputs & Outputs

Query and retrieval

Publications

Mostaguir K, Hoogland C, Binz P, Appel RD. The Make 2D‐DB II package: Conversion of federated two‐dimensional gel electrophoresis databases into a relational format and interconnection of distributed databases. PROTEOMICS. 2003;3(8):1441-1444. doi:10.1002/pmic.200300483. PMID:12923769.

Documentation