BiasDB

BiasDB catalogs literature-reported biased G protein-coupled receptor (GPCR) ligands and their signaling profiles for comparative analysis.


Key Features:

  • Comprehensive data collection: Contains 615 documented cases of signaling bias covering 481 individual ligands across 61 receptors, with entries aggregated from the literature.
  • Detailed ligand annotations: Records include chemical structure, target receptor, type of signaling bias, assay categories used for determining bias, reference ligands, and literature sources.
  • Manual curation and analysis: Entries are manually curated and the assembled dataset is analyzed to identify trends and patterns in biased GPCR signaling.

Scientific Applications:

  • Medicinal chemistry: Supports design and optimization of biased ligands by providing annotated examples of signaling bias and reference compounds.
  • Pharmacology: Enables comparative analysis of GPCR signaling pathways and the functional selectivity of ligands across assay categories.
  • Research and hypothesis generation: Serves as a compiled reference for exploring biased GPCR signaling, planning experiments, and deriving structure–activity relationships.

Methodology:

Entries were compiled through rigorous manual curation of published literature reporting biased GPCR ligands and associated assay annotations, and the dataset was analyzed to characterize bias patterns.

Topics

Collections

Details

Cost:
Free of charge
Operating Systems:
Windows, Linux, Mac
Added:
11/14/2019
Last Updated:
2/15/2024

Operations

Publications

Omieczynski C, Nguyen TN, Sribar D, Deng L, Stepanov D, Schaller D, Wolber G, Bermudez M. BiasDB: A Comprehensive Database for Biased GPCR Ligands. Unknown Journal. 2019. doi:10.1101/742643.