CITE-seq-Count

Tool for counting antibody TAGS from a CITE-seq and/or cell hashing experiment.

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Topics

Transcriptomics Immunoproteins and antigens

Details

License:: MIT
Maturity:: Emerging
Cost:: Free of charge
Tool Type:: command-line tool
Operating Systems:: Linux, Windows, Mac
Programming Languages:: Python
Added:: 6/30/2019
Last Updated:: 4/15/2021

Operations

RNA-Seq quantification

Data Inputs & Outputs

RNA-Seq quantification

Documentation

General

https://hoohm.github.io/CITE-seq-Count/

Downloads

Software package
https://hoohm.github.io/CITE-seq-Count/Installation/
Source code
https://github.com/Hoohm/CITE-seq-Count

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