CandiMeth

Using existing tools in the Galaxy environment we generated the workflow CandiMeth (CANDIdate feature METHylation). This takes as input a differential methylation table from an R-based package and maps it to a reference genome build. A simple interface then allows the user to query the dataset with inputs as straightforward as lists of gene names, or as detailed as bed files containing specific chromosomal coordinates, for more sophisticated analyses.

Topics

Details

License:
GPL-3.0
Maturity:
Emerging
Cost:
Free of charge
Tool Type:
workflow
Operating Systems:
Linux
Programming Languages:
AWK
Added:
2/13/2020
Last Updated:
6/16/2020

Operations

Documentation

Downloads

Links

Galaxy service
http://bit.do/candimeth
(CandiMeth Workflow)
Galaxy service
http://bit.do/candimeth-history
(CandiMeth History with example data)

Related Tools

galaxy
Relation: uses