Canvass

Canvass facilitates quantitative high-throughput screening (qHTS) and computational analysis of natural products to evaluate bioactivity across cell-based and biochemical assays.


Key Features:

  • Natural Product Library: A curated collection of previously isolated and synthesized natural products characterized for structural diversity and elements shared with approved drugs.
  • High-Throughput Screening (HTS/qHTS): Implements quantitative high-throughput screening (qHTS) and automated HTS workflows for rapid evaluation across diverse cell-based and biochemical assays.
  • Physicochemical Characterization: Characterizes library compounds by physicochemical properties and structural diversity.
  • Data Analysis and Quality Control: Applies quality-control metrics and robust statistical analyses, including clustering and compound promiscuity analyses, to assay data.
  • Structural Classification and Activity Profiling: Sorts compounds by structural class and activity profiles to identify differential behaviors and notable activities.

Scientific Applications:

  • Large-scale bioactivity surveys: Enables systematic screening to identify bioactive natural products and potential therapeutic candidates from extensive compound collections.
  • Activity pattern discovery: Uses clustering and activity profiling to reveal differential behaviors across structural classes.
  • Mechanistic hit identification: Identifies specific bioactive compounds, exemplified by (–)-2(S)-cathafoline stabilizing calcium levels within the endoplasmic reticulum.

Methodology:

Automated screening via quantitative high-throughput screening (qHTS) combined with data integration and analysis using quality-control metrics, robust statistical methods, clustering, and compound promiscuity analyses.

Topics

Details

Tool Type:
web application
Added:
1/9/2020
Last Updated:
1/14/2021

Operations

Publications

Kearney SE, Zahoránszky-Kőhalmi G, Brimacombe KR, Henderson MJ, Lynch C, Zhao T, Wan KK, Itkin Z, Dillon C, Shen M, Cheff DM, Lee TD, Bougie D, Cheng K, Coussens N, Dorjsuren D, Eastman RT, Huang R, Iannotti M, Karavadhi S, Klumpp-Thomas C, Roth J, Sakamuru S, Sun W, Titus SA, Yasgar A, Zhang Y, Zhao J, Andrade RB, Brown MK, Burns NZ, Cha JK, Mevers EE, Clardy J, Clement JA, Crooks PA, Cuny GD, Ganor J, Moreno J, Morrill LA, Picazo E, Susick RB, Garg NK, Goess BC, B. Grossman R, Hughes CC, Johnston JN, Joullié MM, Kinghorn AD, Kingston DG, Krische MJ, Kwon O, Maimone TJ, Majumdar S, Maloney KN, Mohamed E, Murphy BT, Nagorny P, Olson DE, Overman LE, Brown LE, Snyder JK, A. Porco, Jr. J, Rivas F, Ross SA, Sarpong R, Sharma I, Shaw JT, Xu Z, Shen B, Shi W, Stephenson C, Verano AL, Tan DS, Tang Y, Taylor RE, Thomson RJ, Vosburg DA, Wu J, Wuest WM, Zakarian A, Zhang Y, Ren T, Zuo Z, Inglese J, Michael S, Simeonov A, Zheng W, Shinn P, Jadhav A, Boxer MB, Hall MD, Xia M, Guha R, Rohde JM. Canvass: A Crowd-Sourced, Natural Product Screening Library for Exploring Biological Space. Unknown Journal. 2018. doi:10.26434/chemrxiv.7172369.v2.