Chipper

Chipper performs semi-automated segmentation and quantitative analysis of acoustic signals from natural sound recordings, focusing on birdsong, to derive reproducible frequency, duration, syllable, note, and song-syntax measurements for comparative and ecological studies.


Key Features:

  • Semi-Automated Segmentation: Automates segmentation of acoustic signals into syllables and notes for large audio recordings.
  • Thresholding for Noise and Syllable Similarity: Applies user-set thresholds for background noise levels and syllable similarity to refine segment detection and measurement.
  • Frequency and Duration Analysis: Extracts quantitative measures of frequency and duration from segmented signals.
  • Spectrogram and Signal Segmentation: Computes spectrograms and segments signals for downstream feature extraction and song-syntax analysis.
  • Synthetic Data Testing: Validates measurement accuracy and repeatability using synthetic songs embedded with varying levels of background noise.
  • Optimization for Diverse Recordings: Tailors analysis parameters to accommodate recordings from multiple species and varying recording qualities.
  • Support for Citizen-Science Recordings: Processes heterogeneous audio data typical of citizen-science contributions.

Scientific Applications:

  • Birdsong Research: Generates reproducible syllable-, note-, and song-syntax measurements for studies of avian communication and behavior.
  • Ecological Monitoring: Provides quantitative acoustic metrics for species monitoring and biodiversity assessment from natural sound recordings.
  • Citizen Science Integration: Enables incorporation of heterogeneous citizen-science audio datasets into large-scale acoustic analyses.

Methodology:

Implemented in Python; performs semi-automated segmentation, applies thresholds for noise levels and syllable similarity, computes spectrograms, extracts frequency and duration measurements, and was validated using synthetic songs embedded with varying levels of background noise.

Topics

Details

Programming Languages:
Python
Added:
1/9/2020
Last Updated:
12/11/2020

Operations

Publications

Searfoss AM, Pino JC, Creanza N. Chipper: Open-source software for semi-automated segmentation and analysis of birdsong and other natural sounds. Unknown Journal. 2019. doi:10.1101/807974.

Searfoss AM, Pino JC, Creanza N. Chipper: Open‐source software for semi‐automated segmentation and analysis of birdsong and other natural sounds. Methods in Ecology and Evolution. 2020;11(4):524-531. doi:10.1111/2041-210x.13368.