Comorbidity4j
Comorbidity4j analyzes electronic health record (EHR) datasets to identify and quantify disease comorbidity patterns and co-occurrence relationships in patient populations.
Key Features:
- Disease Co-occurrence Analysis: Identifies statistically significant co-occurrences of diseases within clinical datasets.
- Comorbidity Index Calculation: Computes multiple comorbidity indices to quantify disease association patterns.
- Patient Stratification: Stratifies patient cohorts by sex, age, and user-defined criteria for subgroup-specific analyses.
- Temporal Directionality Analysis: Examines temporal ordering of disease diagnoses to evaluate directional comorbidity relationships.
- Sex Ratio Evaluation: Calculates sex-specific prevalence patterns among comorbid diseases.
- Comorbidity Network and Heatmap Generation: Produces network graphs and heat maps representing disease association structures.
Scientific Applications:
- Epidemiological Comorbidity Studies: Investigates patterns of co-occurring diseases across large patient populations.
- Clinical Data Mining: Extracts disease association patterns from electronic health record datasets.
- Public Health Research: Analyzes demographic and temporal patterns of comorbid conditions to assess disease burden and risk relationships.
Methodology:
Comorbidity4j processes electronic health record datasets to identify disease co-occurrences, calculates comorbidity indices, performs stratified and temporal analyses of diagnoses, and generates network and heatmap representations of disease associations.
Topics
Details
- License:
- AGPL-3.0
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Java
- Added:
- 7/4/2019
- Last Updated:
- 11/24/2024
Operations
Publications
Ronzano F, Gutiérrez-Sacristán A, Furlong LI. Comorbidity4j: a tool for interactive analysis of disease comorbidities over large patient datasets. Bioinformatics. 2019;35(18):3530-3532. doi:10.1093/bioinformatics/btz061. PMID:30689768.
PMID: 30689768
Documentation
Downloads
Links
Repository
https://github.com/fra82/comorbidity4jIssue tracker
https://github.com/fra82/comorbidity4j/issues