DNA-BOT
DNA-BOT automates low-cost, multi-part DNA assembly to enable construction of large libraries of DNA constructs for synthetic and molecular biology.
Key Features:
- Low-cost automation: Performs automated DNA assembly with consumable costs reported between $1.50 and $5.50 per construct.
- High accuracy and throughput: Demonstrated simultaneous assembly of 88 constructs composed of 10 genetic parts, indicating high accuracy for complex designs.
- Integration with standardized assembly and liquid-handling hardware: Implements the BASIC standardized assembly method on OpenTrons liquid-handling hardware to execute automated builds.
Scientific Applications:
- Exploration of genetic design space: Enables construction of extensive libraries of DNA constructs for systematic exploration of genetic design parameters.
- Evaluation of genetic components in operon contexts: Facilitates evaluation of promoters, ribosome binding sites, and gene order within a three-gene operon design space.
Methodology:
Uses the BASIC standardized assembly method executed on OpenTrons liquid-handling hardware to automate multi-part DNA assembly.
Topics
Details
- License:
- MIT
- Tool Type:
- desktop application
- Programming Languages:
- Python
- Added:
- 1/14/2020
- Last Updated:
- 1/14/2021
Operations
Publications
Storch M, Haines MC, Baldwin GS. DNA-BOT: A low-cost, automated DNA assembly platform for synthetic biology. Unknown Journal. 2019. doi:10.1101/832139.
DOI: 10.1101/832139
Storch M, Haines MC, Baldwin GS. DNA-BOT: a low-cost, automated DNA assembly platform for synthetic biology. Synthetic Biology. 2020;5(1). doi:10.1093/synbio/ysaa010. PMID:32995552. PMCID:PMC7476404.
PMID: 32995552
PMCID: PMC7476404
Funding: - Engineering and Physical Sciences Research Council: EP/R034915/1
- Biotechnology and Biological Sciences Research Council: BB/L027852/1
- EU H2020: 820699