DisV-HPV16

DisV-HPV16 analyzes Human Papillomavirus type 16 (HPV16) oncogene expression from RNA sequencing data to detect viral infection status and characterize virus–host gene expression dynamics in HPV16-associated cancers.

Key Features:

• Rapid Detection: Performs rapid detection of HPV16 and quantification of its oncogene expression from RNA sequencing data.
• Customizable Reference Files: Supports modification of reference files to enable identification of candidate viruses.
• High Reliability and Accuracy: Empirical laboratory experiments have confirmed its accuracy and reliability for HPV16 oncogene expression analysis.
• Comprehensive Insights: Analyzes RNA sequencing data to infer viral infection status and compare expression dynamics between viral and host genes.

Scientific Applications:

• Cancer Research: Enables investigation of HPV16 genetic elements that contribute to carcinogenesis.
• Oncogene Expression Evaluation: Facilitates evaluation of HPV16 oncogene expression levels to study tumor progression and malignancy.

Methodology:

Leverages high-throughput RNA sequencing data to detect viral infection events, assess genome integration, and evaluate HPV16 oncogene expression.