GEOexplorer

GEOexplorer is a software package to simplify the analysis of gene expression datasets, particularly those obtained from the Gene Expression Omnibus (GEO) public database. The tool addresses challenges associated with gene expression analysis, offering a web-based application that enables interactive and reproducible analysis without requiring extensive programming skills. Key features of GEOexplorer include:

Web Application: Implemented as a web application, GEOexplorer directly facilitates interactive and reproducible microarray gene expression analysis through a user-friendly interface.

Integration with Bioconductor: Fully integrated with the core structures of the Bioconductor project, GEOexplorer benefits from the existing infrastructure and resources within the Bioconductor framework.

Exploratory Data Analysis: Users can perform essential steps of exploratory data analysis, allowing for a comprehensive understanding of the dataset. Differential Gene Expression Analysis: The tool supports the intuitive execution of differential gene expression analysis, a crucial step in identifying differentially expressed genes between two groups.

Visualizations: GEOexplorer generates a variety of interactive visualizations, facilitating result exploration and providing users with insights into the analyzed datasets.