GRONS

GRONS aggregates and curates cross-platform genetic and genomic data related to nicotine exposure, nicotine addiction, and smoking-related phenotypes to support identification and analysis of genes influencing tobacco use and related diseases.


Key Features:

  • Comprehensive data collection: Systematic gathering of genetic information from association studies, genome-wide linkage scans, expression analyses of genes and proteins via high-throughput technologies, and single gene/protein experimental studies sourced via literature searches.
  • Cross-platform integration: Integration of genetic data with biological information across study types to enable combined interpretation of results from diverse genomic approaches.
  • Gene categorization: Categorization of genes into distinct groups based on study type, including association studies, linkage scans, expression analyses, and experimental studies.
  • Gene prioritization: Prioritization of candidate genes implicated in nicotine addiction and smoking-related phenotypes for downstream analysis.
  • Comprehensive bioinformatics analyses: Downstream bioinformatics analyses performed on prioritized genes to identify key genetic factors related to susceptibility or resistance to tobacco-related conditions.

Scientific Applications:

  • Nicotine addiction genetics: Identification and analysis of genes that modulate biological responses to nicotine exposure.
  • Smoking-related disease genetics: Investigation of genetic contributions to smoking-related behaviors and diseases.
  • Prioritization for susceptibility/resistance studies: Use of prioritized gene lists to support studies of genetic susceptibility or resistance to tobacco-related conditions.
  • Integrative molecular mechanism studies: Integration of cross-platform genetic evidence to elucidate molecular mechanisms underlying tobacco use behaviors.

Methodology:

Systematic curation and integration of data from association studies, genome-wide linkage scans, high-throughput expression analyses (genes/proteins), and single gene/protein experimental studies; categorization of genes by study type; gene prioritization and downstream bioinformatics analyses and visualization.

Topics

Details

Tool Type:
web application
Added:
1/14/2020
Last Updated:
12/7/2020

Operations

Publications

Fang Z, Yang Y, Hu Y, Li MD, Wang J. GRONS: a comprehensive genetic resource of nicotine and smoking. Database. 2017;2017. doi:10.1093/database/bax097. PMID:31725863. PMCID:PMC5750854.

PMID: 31725863
PMCID: PMC5750854
Funding: - National Natural Science Foundation of China: 31271411