GUV-AP
GUV-AP performs quantitative image analysis of Giant Unilamellar Vesicles (GUVs) by extracting fluorescence-based measurements of membrane dye incorporation and protein binding from microscopy images.
Key Features:
- Automated image analysis: Automated recognition and processing of digital fluorescence microscopy images of GUVs for batch analysis.
- Fluorescence imaging analysis: Extraction and quantification of fluorescence signals to characterize membrane dye distribution and intensity.
- Quantitative protein binding assessment: Fluorescence intensity–based method to quantify protein binding to GUV membranes.
- FIJI/ImageJ macro implementation: Implemented as a macro for FIJI/ImageJ to apply consistent image-processing criteria across samples and datasets.
Scientific Applications:
- Membrane biophysics: Quantitative characterization of membrane composition and dynamics in GUV model systems.
- Protein–membrane interaction studies: Measurement of protein binding affinity and distribution on synthetic membranes.
- Cell biology and biochemical modeling: Investigation of processes related to membrane signaling, transport, and membrane fusion using GUVs as model membranes.
Methodology:
Automated image-processing routines implemented as a FIJI/ImageJ macro perform recognition and processing of digital fluorescence microscopy images and extract fluorescence intensity measurements; the macro applies consistent analysis criteria across datasets for quantitative assessment of membrane dye incorporation and protein binding.
Topics
Details
- License:
- Unlicense
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- desktop application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 7/4/2019
- Last Updated:
- 11/24/2024
Operations
Publications
Sych T, Schubert T, Vauchelles R, Madl J, Omidvar R, Thuenauer R, Richert L, Mély Y, Römer W. GUV-AP: multifunctional FIJI-based tool for quantitative image analysis of Giant Unilamellar Vesicles. Bioinformatics. 2018;35(13):2340-2342. doi:10.1093/bioinformatics/bty962. PMID:30475993.
Documentation
Downloads
- Source codeVersion: 2.0https://github.com/AG-Roemer/GUV-AP/releases/tag/v2.0