HMMER2

Older version of the HMMER3 program (https://bio.tools/hmmer3) used for searching sequence databases for sequence homologs, and for making sequence alignments.

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Topics

Sequence sites, features and motifs

Details

License:: BSD-3-Clause
Maturity:: Mature
Cost:: Free of charge
Tool Type:: library, web application
Operating Systems:: Linux, Windows, Mac
Programming Languages:: Perl, Python
Added:: 3/13/2019
Last Updated:: 6/16/2020

Operations

Database search
Protein feature detection

Documentation

User manual

http://eddylab.org/software/hmmer/Userguide.pdf

Downloads

Downloads page
http://hmmer.org/download.html

Links

Service

https://www.ebi.ac.uk/Tools/hmmer/

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