ISEtools
ISEtools implements Bayesian statistical analyses in R to characterize and calibrate single or multiple ion-selective electrodes (ISEs) by fitting the Nikolskii–Eisenman equation to estimate ion activities and limits of detection with quantified uncertainty.
Key Features:
- Bayesian Statistical Analysis: Incorporates Bayesian methods to analyze ISE data using all collected observations and provide principled uncertainty quantification.
- Core Functionalities: Includes loadISEdata to load and prepare datasets, describeISE to compute descriptive statistics, and analyseISE to apply Bayesian models while automatically determining data structures and appropriate models.
- Nikolskii–Eisenman Equation Fitting: Applies Bayesian models to fit the Nikolskii–Eisenman equation for activity estimation and electrode calibration.
- Limit of Detection and Uncertainty: Produces limit-of-detection estimates with associated uncertainty quantification.
- Multiple ISEs / Sensor Arrays: Supports analysis of single and multiple electrodes, including sensor arrays, for concurrent calibration and comparison.
- Automated Analysis: Automates model fitting and result extraction, including automatic determination of data structure and model selection.
- R Integration: Implemented for use within the R programming environment.
- Output Formatting: Returns results and figures formatted for interpretation and publication.
Scientific Applications:
- Environmental Chemistry: Enables precise estimation of ion activities in environmental samples for monitoring and analysis.
- Analytical Chemistry and Sensor Studies: Supports calibration, validation, and comparative studies of ISEs and sensor arrays to improve ion concentration measurements.
Methodology:
Integrates all relevant data, applies Bayesian model fitting to the Nikolskii–Eisenman equation, automatically determines data structures and appropriate models, and extracts limits of detection with uncertainty quantification.
Topics
Details
- License:
- GPL-2.0
- Tool Type:
- command-line tool, library
- Programming Languages:
- R
- Added:
- 1/9/2020
- Last Updated:
- 12/14/2020
Operations
Publications
Dillingham PW, Alsaedi BS, Radu A, McGraw CM. Semi-Automated Data Analysis for Ion-Selective Electrodes and Arrays Using the R Package ISEtools. Sensors. 2019;19(20):4544. doi:10.3390/s19204544. PMID:31635039. PMCID:PMC6832938.