InterSpin
InterSpin provides integrated computational tools to improve signal assignment and molecular characterization in low- and high-field Nuclear Magnetic Resonance (NMR) datasets.
Key Features:
- Sensitivity improvement (spectral integration): Enhances signal-to-noise ratio by integrating spectra to facilitate detection of weak signals.
- Peaks separation (non-negative sparse coding): Separates overlapping peaks using non-negative sparse coding to clarify spectral components.
- SpinLIMS database of standard spectra: Stores standard spectra for a wide range of molecules in both solid and solution states and supports searches under varied experimental conditions.
- SpinMacro (macromolecular assignment): Assigns macromolecules in natural mixtures by analyzing solid-state ^13C peaks and dimethyl sulfoxide-dissolved ^1H-^13C correlation peaks.
- InterAnalysis (small-molecule assignment): Integrates ^1H-^13C correlation peaks with ^1H-*J* correlation peaks for small molecules dissolved in D2O or deuterated methanol to narrow candidate metabolites.
- Database interoperability (SpinLIMS client software): Provides client software to share and reuse NMR data across platforms and enable cross-dataset searches.
Scientific Applications:
- Solid-state and benchtop low-field NMR: Addresses broad and complex spectra typical of solid-state and benchtop instruments.
- Molecular assignment in complex mixtures: Supports assignment workflows for samples containing small molecules and macromolecules.
- Metabolite identification: Narrows metabolite candidates from ^1H-^13C and ^1H-*J* correlation data in D2O or deuterated methanol solutions.
- Applied sciences: Enables precise molecular characterization in food science, materials science, and environmental studies.
Methodology:
Computational methods explicitly include spectral integration for sensitivity improvement, non-negative sparse coding for peak separation, storage and searchable indexing of spectra in SpinLIMS, analysis of solid-state ^13C and dimethyl sulfoxide-dissolved ^1H-^13C correlation peaks (SpinMacro), integration of ^1H-^13C with ^1H-*J* correlation peaks for small molecules (InterAnalysis), and client software-mediated data sharing.
Topics
Details
- Tool Type:
- web application
- Added:
- 11/14/2019
- Last Updated:
- 12/14/2020
Operations
Publications
Yamada S, Ito K, Kurotani A, Yamada Y, Chikayama E, Kikuchi J. InterSpin: Integrated Supportive Webtools for Low- and High-Field NMR Analyses Toward Molecular Complexity. ACS Omega. 2019;4(2):3361-3369. doi:10.1021/acsomega.8b02714. PMID:31459550. PMCID:PMC6648201.