Joint Multi-Modal Longitudinal Regression Classification

Joint Multi-Modal Longitudinal Regression Classification performs simultaneous regression and classification on longitudinal multi-modal clinical data to predict Alzheimer's Disease outcomes and identify associated biomarkers using data from the Alzheimer's Disease Neuroimaging Initiative (ADNI).


Key Features:

  • Multi-Modal Integration: Combines genetic information, brain imaging (brain scans), and other clinical modalities into a joint analysis of longitudinal data.
  • Simultaneous Regression and Classification: Models continuous outcomes such as cognitive scores and categorical outcomes such as Alzheimer's Disease diagnosis within a unified framework.
  • Regularization Techniques: Employs regularization methods to select and identify biomarkers relevant to Alzheimer's Disease.
  • Iterative Algorithm with Convergence Proof: Formulates a non-smooth optimization problem and solves it using an efficient iterative algorithm that is proven to converge.
  • Longitudinal Modeling: Explicitly models temporal trajectories across timepoints to leverage longitudinal information.

Scientific Applications:

  • Alzheimer's Disease prediction: Applied to the ADNI cohort to predict cognitive status and clinical diagnosis of Alzheimer's Disease.
  • Biomarker identification for AD: Identifies potential biomarkers associated with Alzheimer's Disease through regularization and multi-modal integration.
  • Longitudinal progression analysis: Analyzes disease progression over time using longitudinal ADNI data.
  • Extension to other biomedical studies: Applicable to other biomedical research involving longitudinal multi-modal clinical data.

Methodology:

Combines genetic data, brain imaging, and other clinical information for joint modeling of longitudinal data; formulates and solves a non-smooth optimization problem via an iterative algorithm with a convergence proof; applies regularization techniques for biomarker selection; validated by experiments on the ADNI cohort.

Topics

Details

Tool Type:
command-line tool
Programming Languages:
Python
Added:
1/14/2020
Last Updated:
11/24/2024

Operations

Publications

Brand L, Nichols K, Wang H, Shen L, Huang H. Joint Multi-Modal Longitudinal Regression and Classification for Alzheimer’s Disease Prediction. IEEE Transactions on Medical Imaging. 2020;39(6):1845-1855. doi:10.1109/tmi.2019.2958943. PMID:31841400. PMCID:PMC7380699.

PMID: 31841400
PMCID: PMC7380699
Funding: - National Science Foundation: CNS 1932482, IIS 1652943, IIS 1849359 - National Institutes of Health: R01 EB022574, RF1 AG063481 - NSF: DBI 1836866, IIS 1836938, IIS 1837956, IIS 1837964, IIS 1838627, IIS 1845666, IIS 1852606 - NIH: R01 AG049371