MOLGENIS Research
MOLGENIS Research manages, analyzes, visualizes, and shares large-scale genomics, proteomics, metabolomics, and other omics datasets to support biomedical research.
Key Features:
- Data Management: Provides a platform to collect, store, annotate, and query large-scale biomedical and omics datasets.
- Analysis Capabilities: Implements analytical functionalities for processing complex biological and omics data.
- Visualization Tools: Includes visualization options for interpreting omics data and analytical results.
- Data Sharing: Supports sharing of datasets to enable transparency and collaboration in the research community.
Scientific Applications:
- Genomics: Supports management, analysis, and visualization of large-scale genomics datasets.
- Proteomics: Enables storage, analysis, and visualization of proteomics data.
- Metabolomics: Facilitates handling and interpretation of metabolomics datasets.
- Other omics disciplines: Applies to additional omics data types for integrated biomedical research.
Methodology:
Provides multiple deployment options including source code installation, a precompiled WAR file, and Docker container setup.
Topics
Details
- License:
- Other
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- R, Python
- Added:
- 8/4/2019
- Last Updated:
- 11/24/2024
Operations
Publications
van der Velde KJ, Imhann F, Charbon B, Pang C, van Enckevort D, Slofstra M, Barbieri R, Alberts R, Hendriksen D, Kelpin F, de Haan M, de Boer T, Haakma S, Stroomberg C, Scholtens S, van de Geijn G, Festen EAM, Weersma RK, Swertz MA. MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians. Bioinformatics. 2018;35(6):1076-1078. doi:10.1093/bioinformatics/bty742. PMID:30165396. PMCID:PMC6419911.
Documentation
Downloads
- Software packageVersion: 0.1http://molgenis.org/downloads/molgenis-research/MOLGENIS_Research_v0.1.xlsx
- Software packageVersion: 5.2.0http://search.maven.org/remotecontent?filepath=org/molgenis/molgenis-app/5.2.0/molgenis-app-5.2.0.warMOLGENIS app