MPS-Db

MPS-Db provides a centralized database for Microphysiological Systems (MPS) data to support design, development, validation, and translational interpretation of MPS models in biomedical research and drug discovery.


Key Features:

  • Data aggregation: Captures and aggregates design, application, and performance data from diverse MPS configurations, including static microplate models and integrated multi-organ microfluidic systems.
  • Integration with reference data: Associates MPS data with chemical, biochemical, pre-clinical, clinical, and post-marketing reference sources to support model design, validation, and interpretation.
  • Study data management: Manages multifactor, multichip study data including upload, analysis, review, and computational modeling workflows.
  • Computational modeling tools: Hosts computational tools for modeling disease mechanisms, compound toxicity, and drug pharmacokinetics (PK) predictions.
  • Disease portal module: Provides links to external resources for designing MPS disease models and studies.

Scientific Applications:

  • Study management: Facilitates organization, analysis, and interpretation of complex MPS experimental datasets.
  • Reproducibility assessment: Supports assessment of reproducibility and consistency of MPS model outputs across experiments.
  • Concordance with clinical findings: Enables evaluation of concordance between MPS results and clinical data to enhance translational relevance.
  • ADME‑Tox and PK/PD prediction: Supports experimental ADME‑Tox studies and computational prediction of pharmacokinetic/pharmacodynamic (PK/PD) profiles.
  • Case study — LAMPS: Demonstrates application with the liver acinus MPS model (LAMPS) for study data management, experimental design, and analysis.

Methodology:

Computational modeling for disease mechanisms, compound toxicity, and drug PK predictions, and a Disease Portal module linking to external resources for MPS disease model design and studies.

Topics

Details

Tool Type:
web application
Added:
11/14/2019
Last Updated:
12/29/2020

Operations

Publications

Schurdak M, Vernetti L, Bergenthal L, Wolter QK, Shun TY, Karcher S, Taylor DL, Gough A. Applications of the Microphysiology Systems Database for Experimental ADME-Tox and Disease Models. Unknown Journal. 2019. doi:10.1101/776500.