MRICloud
MRICloud performs automated neonatal brain MRI parcellation and quantification using Multi-Atlas Label Fusion (MALF) and a T1-weighted neonatal multi-atlas to support structure-specific developmental analyses.
Key Features:
- Multi-Atlas Label Fusion (MALF): Employs MALF for high-precision brain segmentation and parcellation based on anatomical units.
- T1-weighted neonatal multi-atlas repository: Utilizes a T1-weighted neonatal multi-atlas repository as the reference set for neonatal-specific labeling and segmentation.
- Automated parcellation aligned to manual segmentation: Provides fully automated image parcellation that aligns closely with manual segmentation methods.
- Volume quantification: Quantifies whole and regional brain volumes to assess morphological changes and signal intensity variations.
- Developmental trajectory analysis: Generates developmental trajectories from regional and whole-brain measures for neonatal developmental assessment.
- Structure-by-structure analysis: Enables analysis on a structure-by-structure basis to investigate normal and abnormal developmental processes.
Scientific Applications:
- Developmental neuroscience: Supports investigation of early brain development and morphological changes in neonates.
- Neonatology: Enables quantitative assessment of neonatal brain structure for clinical and research studies in neonatology.
- Pediatric neuroradiology: Facilitates detailed regional analysis relevant to diagnosis and monitoring in pediatric neuroradiology.
- Early diagnosis and intervention research: Supports identification of deviations from typical development to inform early diagnosis and intervention strategies.
Methodology:
The method applies Multi-Atlas Label Fusion (MALF) using a T1-weighted neonatal multi-atlas repository to perform anatomy-based parcellation and quantify whole and regional brain volumes for structure-by-structure analysis.
Topics
Details
- License:
- Unlicense
- Maturity:
- Mature
- Cost:
- Free of charge (with restrictions)
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 8/9/2019
- Last Updated:
- 6/16/2020
Operations
Publications
Otsuka Y, Chang L, Kawasaki Y, Wu D, Ceritoglu C, Oishi K, Ernst T, Miller M, Mori S, Oishi K. A Multi‐Atlas Label Fusion Tool for Neonatal Brain MRI Parcellation and Quantification. Journal of Neuroimaging. 2019;29(4):431-439. doi:10.1111/jon.12623. PMID:31037800. PMCID:PMC6609486.