MetWork
MetWork predicts metabolite structures and anticipates novel natural products from identified precursor molecules by combining MS/MS prediction with a collaborative library of biochemical transformations.
Key Features:
- MS/MS Prediction Module: Incorporates MS/MS predictive capabilities to anticipate metabolite structures from tandem mass spectrometry (MS/MS) data.
- Collaborative Library of Biochemical Transformations: Utilizes a library of biochemical transformations to generate and annotate potential metabolite structures from precursor molecules.
- Nonpeptidic Molecular Networking: Implements a nonpeptidic molecular networking-based approach to relate MS/MS spectra and support structure-driven discovery.
- Early Discovery Capability: Provides structural insights prior to compound isolation to enable early-stage prediction of new compound structures.
Scientific Applications:
- Natural Product Discovery: Applied to the prediction and anticipation of novel natural products from complex biological sources.
- Bromotryptamine Derivatives: Used for identifying and predicting novel bromotryptamine derivatives.
- Alkaloid Discovery: Employed to discover new monoterpene indole alkaloids and to predict previously undescribed sarpagine-like N-oxide alkaloids.
- Targeted Isolation from Alstonia balansae: Enabled targeted identification of unique alkaloids in Alstonia balansae through pre-isolation annotations.
Methodology:
MetWork uses a nonpeptidic molecular networking-based discovery workflow, generating targeted structures through computer-generated annotations and leveraging molecular networking together with MS/MS data.
Topics
Details
- Tool Type:
- web application
- Added:
- 11/14/2019
- Last Updated:
- 12/28/2020
Operations
Publications
Fox Ramos AE, Pavesi C, Litaudon M, Dumontet V, Poupon E, Champy P, Genta-Jouve G, Beniddir MA. CANPA: Computer-Assisted Natural Products Anticipation. Analytical Chemistry. 2019;91(17):11247-11252. doi:10.1021/acs.analchem.9b02216. PMID:31369240.
PMID: 31369240
Funding: - Agence Nationale de la Recherche: ANR-15-CE29-0001
- Consejo Nacional de Ciencia, Tecnolog?a e Innovaci?n Tecnol?gica: 239-2015-FONDECYT