MetWork

MetWork predicts metabolite structures and anticipates novel natural products from identified precursor molecules by combining MS/MS prediction with a collaborative library of biochemical transformations.


Key Features:

  • MS/MS Prediction Module: Incorporates MS/MS predictive capabilities to anticipate metabolite structures from tandem mass spectrometry (MS/MS) data.
  • Collaborative Library of Biochemical Transformations: Utilizes a library of biochemical transformations to generate and annotate potential metabolite structures from precursor molecules.
  • Nonpeptidic Molecular Networking: Implements a nonpeptidic molecular networking-based approach to relate MS/MS spectra and support structure-driven discovery.
  • Early Discovery Capability: Provides structural insights prior to compound isolation to enable early-stage prediction of new compound structures.

Scientific Applications:

  • Natural Product Discovery: Applied to the prediction and anticipation of novel natural products from complex biological sources.
  • Bromotryptamine Derivatives: Used for identifying and predicting novel bromotryptamine derivatives.
  • Alkaloid Discovery: Employed to discover new monoterpene indole alkaloids and to predict previously undescribed sarpagine-like N-oxide alkaloids.
  • Targeted Isolation from Alstonia balansae: Enabled targeted identification of unique alkaloids in Alstonia balansae through pre-isolation annotations.

Methodology:

MetWork uses a nonpeptidic molecular networking-based discovery workflow, generating targeted structures through computer-generated annotations and leveraging molecular networking together with MS/MS data.

Topics

Details

Tool Type:
web application
Added:
11/14/2019
Last Updated:
12/28/2020

Operations

Publications

Fox Ramos AE, Pavesi C, Litaudon M, Dumontet V, Poupon E, Champy P, Genta-Jouve G, Beniddir MA. CANPA: Computer-Assisted Natural Products Anticipation. Analytical Chemistry. 2019;91(17):11247-11252. doi:10.1021/acs.analchem.9b02216. PMID:31369240.

PMID: 31369240
Funding: - Agence Nationale de la Recherche: ANR-15-CE29-0001 - Consejo Nacional de Ciencia, Tecnolog?a e Innovaci?n Tecnol?gica: 239-2015-FONDECYT

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