MetaR

MetaR provides a language-workbench-based framework that defines domain-specific languages and generates R code to package and distribute analytical methods for biological data analysis.


Key Features:

  • Language Workbench Technology (LWT): Leverages language workbench technology to support development of domain-specific languages for bioinformatics analyses.
  • Domain-Specific Languages: Enables creation of tailored languages that encapsulate state-of-the-art analytical methods for specific biological tasks.
  • R Integration: Generates R code compatible with the R ecosystem to interoperate with existing R libraries and workflows.
  • Method Packaging and Distribution: Allows method developers to package advanced analysis techniques into MetaR language constructs for distribution.

Scientific Applications:

  • Genomics: Applied to analysis of large-scale genomic datasets requiring specialized analytical methods.
  • Proteomics: Applied to processing and analysis of proteomic data and associated quantitative workflows.
  • Systems Biology: Applied to systems-level data integration and modeling where composite analytical constructs are required.

Methodology:

Implements language workbench technology to define domain-specific languages that generate R code for packaging and distribution of analytical methods.

Topics

Details

Tool Type:
command-line tool
Programming Languages:
R, Java
Added:
1/9/2020
Last Updated:
12/28/2020

Operations

Publications

Campagne F, Digan WE, Simi M. MetaR: simple, high-level languages for data analysis with the R ecosystem. Unknown Journal. 2015. doi:10.7287/peerj.preprints.1465v2.

Links