MiXCR

Software for extraction of T- and B-cell receptor repertoires from any type of sequencing data.

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Topics

Immunoproteins, genes and antigens Sequence sites, features and motifs

Details

License:: Other
Maturity:: Mature
Cost:: Free of charge (with restrictions)
Tool Type:: workflow
Operating Systems:: Linux, Windows, Mac
Programming Languages:: Java
Added:: 6/18/2019
Last Updated:: 7/29/2019

Operations

Sequence alignment
Sequence analysis
Sequence assembly

Publications

Bolotin DA, Poslavsky S, Mitrophanov I, Shugay M, Mamedov IZ, Putintseva EV, Chudakov DM. MiXCR: software for comprehensive adaptive immunity profiling. Nature Methods. 2015;12(5):380-381. doi:10.1038/nmeth.3364.

DOI: 10.1038/nmeth.3364

Documentation

Training material

https://mixcr.readthedocs.io/en/master/index.html

Tutorial material

Downloads

Binaries
https://milaboratory.com/software/mixcr/

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