Multilayer Extraction

Multilayer Extraction identifies densely connected vertex-layer communities in multilayer networks using a significance-based score, implemented as an R package, to detect statistically significant, potentially overlapping communities across binary or weighted layers by comparison to a fixed degree random graph model.


Key Features:

  • Vertex-Layer Community Identification: Detects strongly connected vertex-layer communities across different layers of multilayer networks.
  • Significance-Based Scoring: Quantifies connectivity of vertex-layer sets with a significance-based score derived from observed connection strengths.
  • Fixed Degree Random Graph Comparison: Compares observed scores against a fixed degree random graph model to assess statistical significance.
  • Binary and Weighted Relationships: Supports analysis of both binary and weighted relationships among a fixed group of objects.
  • Heterogeneous Layer Handling: Accommodates heterogeneity in layer-specific community structure and captures overlapping communities and background vertex-layer pairs.
  • Optimizer Consistency: Employs an optimizer established for consistency under the multilayer stochastic block model.
  • Performance Evaluation: Validation through theoretical analysis and practical simulations to evaluate community detection performance.

Scientific Applications:

  • Biological Networks: Analysis of interactions among genes or proteins operating within different biological layers.
  • Social Network Analysis: Exploration of social dynamics where individuals participate in multiple types of relationships simultaneously.
  • Infrastructure Systems: Study of interconnected systems such as transportation networks with varying operational layers.

Methodology:

Optimizes a multilayer score derived from the strength of connections within observed vertex-layer sets and compares this score to a fixed degree random graph model, with optimizer consistency demonstrated under the multilayer stochastic block model.

Details

Tool Type:
command-line tool
Programming Languages:
R
Added:
1/14/2020
Last Updated:
12/29/2020

Operations

Publications

Wilson JD, et al. Community Extraction in Multilayer Networks with Heterogeneous Community Structure. J Mach Learn Res. 2017; 18:5458-5506.

PMID: 31871433
PMCID: PMC6927681