PGConverter

This library is primarily to offer a command-line tool to convert between the following formats for proteogenomics related data. It is also possible to convert regular non-proteogenomics mzIdentML or PRIDE XML files to mzTab. A secondary function of this library is to gather metadata and statistics about mzIdentML, mzTab, and PRIDE XML files for validation purposes. Primarily this tool is powered by the ms-data-core-api library to read/write files. Primarily this tool is powered by the ms-data-core-api library to read/write files.

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Collections

Details

License:
Apache-2.0
Cost:
Free of charge
Tool Type:
command-line tool, library
Operating Systems:
Linux, Mac
Programming Languages:
Java
Added:
6/18/2019
Last Updated:
6/16/2020

Operations

Documentation

Installation instructions', 'User manual
https://github.com/PRIDE-Toolsuite/PGConverter

Downloads

Links