SAIM

SAIM controls precision laser beam scanning and synchronization to enable azimuthal scanning SAIM and multiangle TIRF acquisitions that reduce uneven excitation fields caused by laser interference.


Key Features:

  • Precision Synchronization: Ensures accurate timing between the instrument computer, beam scanning system, and excitation source to improve data quality and reduce sample damage during acquisitions.
  • Azimuthal Beam Scanning: Implements azimuthal beam scanning principles from TIRF to eliminate uneven excitation fields caused by laser interference.
  • Integrated Precision Analog Circuitry: Provides waveform generation, multiplexed analog outputs, and native hardware triggers to support fast circle-scanning acquisitions for azimuthal scanning SAIM and multiangle TIRF.
  • Optimized Firmware Routines: Uses tailored firmware routines to enhance acquisition performance and reduce artifacts arising from synchronization errors typical of software control.
  • Low Communication Latency: Minimizes communication latency to reduce image intensity fluctuations and reconstruction artifacts during microscopy operations.
  • Microcontroller-based Prototyping Architecture: Employs concepts from Arduino microcontroller boards for a programmable hardware architecture supporting instrument control.

Scientific Applications:

  • Azimuthal scanning SAIM: Enables SAIM experiments requiring azimuthal beam scanning to obtain consistent excitation and axial position measurements.
  • Multiangle TIRF: Supports multiangle TIRF acquisitions that require rapid circle-scanning and precise timing of excitation sources.
  • High-precision optical microscopy beam control: Applies to microscopy studies that demand coordinated control of beam scanning, waveform output, and hardware triggering to reduce imaging artifacts.

Methodology:

Firmware implements waveform generation, multiplexed analog outputs, native hardware triggers, and precise synchronization between the instrument computer, beam scanning system, and excitation source to perform fast circle-scanning acquisitions and reduce synchronization-induced artifacts.

Topics

Details

Programming Languages:
C++, C
Added:
11/14/2019
Last Updated:
12/16/2020

Operations

Publications

Colville MJ, Park S, Zipfel WR, Paszek MJ. High-speed device synchronization in optical microscopy with an open-source hardware control platform. Scientific Reports. 2019;9(1). doi:10.1038/s41598-019-48455-z. PMID:31434941. PMCID:PMC6704125.

PMID: 31434941
PMCID: PMC6704125
Funding: - National Science Foundation: 1752226, DGE-1650441 - U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences: 2T32GM008267 - U.S. Department of Health & Human Services | NIH | National Cancer Institute: R33-CA193043, U54-CS210184