SDE
SDE models population-count dynamics by deriving stochastic differential equations from the master equation (ME) and related continuous-time stochastic processes to capture both mean and variance for decision modeling and cost-effectiveness analyses.
Key Features:
- Stochastic modeling: Captures both the mean and the variance of population trajectories rather than only mean behavior.
- Continuous approximation via FPE: Derives a continuous approximation to the master equation (ME) by relaxing the integrality constraint using the Fokker Planck Equation (FPE) for real-valued random vectors.
- Direct SDE derivation: Derives stochastic differential equations from first principles to model the time-evolution of population counts as a stochastic process.
- Algorithmic implementation: Provides an algorithm to construct and solve the SDE via simulation using the same model parameters as cohort models.
- Empirical agreement: Matches population trajectories, means, and variances with other commonly used methods.
- Computational efficiency: Demonstrates superior computational speed compared with traditional microsimulation techniques.
Scientific Applications:
- Decision modeling: Quantifies expected outcomes and variability in decision-analytic models by modeling stochastic population dynamics.
- Cost-effectiveness analysis: Provides estimates of cohort means and variances to support cost-effectiveness studies.
- Population dynamics and cohort model validation: Enables comparison and validation of cohort model trajectories against alternative methods, including microsimulation.
Methodology:
The method derives a continuous approximation from the master equation (ME) via the Fokker Planck Equation (FPE) and/or directly derives stochastic differential equations from first principles, and it solves the resulting SDEs using simulation-based methods.
Topics
Details
- License:
- Unlicense
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- R, Julia
- Added:
- 8/9/2019
- Last Updated:
- 6/16/2020
Operations
Publications
Iskandar R. Adding noise to Markov cohort models. Unknown Journal. 2019. doi:10.1101/635177.
DOI: 10.1101/635177
Documentation
Links
Issue tracker
https://github.com/rowaniskandar/SDE/issues