Squiggle

Squiggle visualizes raw DNA sequences as two-dimensional graphical representations to support interpretation of sequence data.

Key Features:

• Interactive visualization: Provides dynamic, interactive visual renderings that enable exploration of raw DNA sequence features.
• Two-dimensional graphical representations: Converts raw DNA sequences into two-dimensional graphs for visual analysis.
• Integration of sequence visualization algorithms: Implements multiple prior sequence visualization algorithms and introduces novel visualization methods to enhance interpretability.

Scientific Applications:

• Genomic studies: Facilitates visual analysis of DNA sequence data in genomics research.
• Molecular biology research: Supports molecular biology investigations that require sequence-level visual interpretation.

Methodology:

Implemented in Python 3 and incorporating multiple prior sequence visualization algorithms alongside novel visualization methods.