TITAN

TITAN generates and manipulates electric fields in biological systems to quantify intrinsic and applied electrostatic effects on enzymatic reactivity (PMID: 31568581).


Key Features:

  • Electric Field Generation: Creates a range of external electric fields to probe their influence on biological systems.
  • Quantification of Local Electric Fields: Quantifies intrinsic electric fields in proteins and other biomolecules using Coulomb's Law.
  • Integration with Computational Methods: Supports coupling to quantum mechanics (QM), molecular mechanics (MM), QM/MM hybrid methods, and molecular dynamics simulations.

Scientific Applications:

  • Enzymatic Reactivity Analysis: Elucidates the role of intrinsic and external electric fields in enzymatic reactions.
  • Cytochrome P450 OleT_JE Studies: Applied to cytochrome P450 OleT_JE to study hydrogen transfer reactions (PMID: 31568581).
  • Protein Matrix Effects: Demonstrates that the protein matrix in P450 OleT_JE acts as a moderate catalyst for hydrogen transfer.
  • Electric Field Modulation: Shows that an oriented external electric field along the Fe─O bond in compound I significantly alters the reaction barrier, indicating modulation of enzymatic activity.
  • Spin Density Correlation: Relates observed catalytic or inhibitory effects to changes in the calculated spin density on the oxygen atom.

Methodology:

Models and quantifies electric fields using Coulomb's Law and integrates those field calculations with QM, MM, QM/MM and molecular dynamics simulations.

Topics

Details

Added:
1/9/2020
Last Updated:
12/28/2020

Operations

Publications

Stuyver T, Huang J, Mallick D, Danovich D, Shaik S. TITAN: A Code for Modeling and Generating Electric Fields—Features and Applications to Enzymatic Reactivity. Journal of Computational Chemistry. 2019;41(1):74-82. doi:10.1002/jcc.26072. PMID:31568581.

PMID: 31568581
Funding: - Fonds Wetenschappelijk Onderzoek: 1203419N - Israel Science Foundation: ISF 520/18