Viral Host Range database

Viral Host Range database compiles experimentally validated virus–host interaction data to support analysis of host susceptibility across viruses infecting archaea, bacteria, and eukaryotes.


Key Features:

  • Curated Virus–Host Interaction Repository: Stores experimental host range data describing which hosts are susceptible to infection by specific viruses.
  • Cross-Domain Host Coverage: Includes virus–host interaction data spanning archaea, bacteria, and eukaryotic organisms.
  • Virus-to-Host and Host-to-Virus Querying: Enables retrieval of viruses infecting a given host or hosts susceptible to a specific virus.
  • Experimental Data Integration: Incorporates experimentally derived host range datasets from multiple laboratories.
  • Publication and Sequence Linkage: Associates virus–host interaction records with relevant scientific publications and sequence identifiers.

Scientific Applications:

  • Virus–Host Interaction Analysis: Investigates patterns of viral infection across host organisms.
  • Cross-Species Transmission Studies: Supports analysis of host range expansion and potential viral spillover events.
  • Evolutionary Virology Research: Examines host range diversity to study viral evolution and adaptation.

Methodology:

Viral Host Range database aggregates and curates experimentally determined virus–host interaction data, organizes host range information across multiple biological domains, and links interaction records with associated publications and sequence identifiers.

Topics

Details

License:
MIT
Maturity:
Mature
Tool Type:
api, web application
Operating Systems:
Mac, Windows, Linux
Added:
2/8/2022
Last Updated:
11/24/2024

Operations

Publications

Lamy-Besnier Q, Brancotte B, Ménager H, Debarbieux L. Viral Host Range database, an online tool for recording, analyzing and disseminating virus–host interactions. Bioinformatics. 2021;37(17):2798-2801. doi:10.1093/bioinformatics/btab070. PMID:33594411. PMCID:PMC8428608.

Documentation

FAQ', 'Installation instructions', 'Quick start guide', 'User manual
https://hub.pages.pasteur.fr/viralhostrangedb/

Downloads

Links